After Seto Kaiba defeated Maximillion Pegasus he picks up two cards with one of them not belonging to Pegasus, later on Kaiba activates the "Pyramid of Light", which not only bears a striking resemblance to its namesake in the museum, but also prevents Yugi from using any of the Egyptian Gods! Before long, Kaiba has his "Blue-Eyes Ultimate Dragon" on the field, but to Yugi's surprise, he sacrifices it to summon a monster known as the "Blue-Eyes Shining Dragon", which is even stronger, the Pyramid of Light also pulls the souls of Yugi, Joey, and Tristan into Yugi's Millenium Puzzle, where they are chased by a group of mummies controlled by an unknown force.
Kaiba could win the duel there and then, but he wants to humiliate Yugi by wiping him out with his own Egyptian Gods! His "Pyramid of Light" removed the gods from play, and he wants to play "Return from the Different Dimension" to get them under his control. Of course, to do that, he needs to destroy his Pyramid of Light first, otherwise it would just destroy the gods again! Kaiba commands his "Blue-Eyes Shining Dragon" to use its "Shining Nova" effect, which allows it to sacrifice itself to destroy anything on the field - and he aims it at the Pyramid of Light. Suddenly, a ghostly voice calls out, "This I cannot allow!", and the Pyramid stays exactly where it is. Then, a man rises up from behind Kaiba, throws him aside, and takes over the duel himself.
It's Anubis, the Egyptian Lord of the Dead, whom the Pharaoh destroyed 5000 years ago. But now he's back with the Pyramid of Light around his neck and his secret weapon - "Theinen the Great Sphinx". On top of this, Téa, Joey, Tristan and Yugi are all trapped inside the Millennium Puzzle, leaving the Pharaoh to duel all alone. Putting all his faith into the cards, Yugi draws the "Double Spell" card, which allows him to discard his other spell card to activate "Monster Reborn" from Seto's Graveyard. He uses it to revive "Blue-Eyes Shining Dragon", who then destroys the "Pyramid of Light" (after it was weakened by Yugi from inside the Millennium Puzzle). With the Pyramid gone, Yugi activates "Reverse of Reverse" to activate Kaiba's "Return from the Different Dimension". The God Monsters return, destroy the Great Sphinx and Anubis is seemingly defeated. But a giant jackal - the ancient Egyptian representation of Anubis, the Lord of the Dead - rises from the remains of the Pyramid.